R Package - uptasticsearch¶

Source: uptake/uptasticsearch: An Elasticsearch client tailored to data science workflows. (github.com)

Contents¶

Overview¶

\<\<\<\<\<\<\< HEAD:3-Resources/Tools/R/R Packages/Database R Packages/R Package - uptasticsearch.md¶

uptaasticsearch is an Elasticsearch client tailored to data science workflows bundled as an R Package.

uptaasticsearch is an Elasticsearch client tailored to data science workflows bundled as an R Package. >>>>>>> develop:3-Resources/Tools/Developer Tools/Languages/R/R Packages/Database R Packages/R Package - uptasticsearch.md

uptasticsearch tackles the issue of getting data out of Elasticsearch and into a tabular format in R and Python. It should work for all versions of Elasticsearch from 1.0.0 onwards, but is not regularly tested against all of them. If you run into a problem, please open an issue.

How it Works¶

The core functionality of this package is the es_search() function. This returns a data.table containing the parsed result of any given query. Note that this includes aggs queries.

Installation¶

R¶

Releases of this package can be installed from CRAN:

install.packages(
  'uptasticsearch'
  , repos = "http://cran.rstudio.com"
)

or from conda-forge

conda install -c conda-forge r-uptasticsearch

To use the development version of the package, which has the newest changes, you can install directly from GitHub

remotes::install_github(
  "uptake/uptasticsearch"
  , subdir = "r-pkg"
)

Python¶

This package is not currently available on PyPi. To build the development version from source, clone this repo, then :

cd py-pkg
pip install .

Usage Examples¶

The examples presented here pertain to a fictional Elasticsearch index holding some information on a movie theater business.

Example 1: Get a Batch of Documents¶

The most common use case for this package will be the case where you have an Elasticsearch query and want to get a data frame representation of many resulting documents.

In the example below, we use uptasticsearch to look for all survey results in which customers said their satisfaction was “low” or “very low” and mentioned food in their comments.

library(uptasticsearch)

# Build your query in an R string
qbody <- '{
  "query": {
    "filtered": {
      "filter": {
        "bool": {
          "must": [
            {
              "exists": {
                "field": "customer_comments"
              }
            },
            {
              "terms": {
                "overall_satisfaction": ["very low", "low"]
              }
            }
          ]
        }
      }
    },
    "query": {
      "match_phrase": {
        "customer_comments": "food"
      }
    }
  }
}'

# Execute the query, parse into a data.table
commentDT <- es_search(
    es_host = 'http://mydb.mycompany.com:9200'
    , es_index = "survey_results"
    , query_body = qbody
    , scroll = "1m"
    , n_cores = 4
)

Example 2: Aggregation Results¶

Elasticsearch ships with a rich set of aggregations for creating summarized views of your data. uptasticsearch has built-in support for these aggregations.

In the example below, we use uptasticsearch to create daily timeseries of summary statistics like total revenue and average payment amount.

library(uptasticsearch)

# Build your query in an R string
qbody <- '{
  "query": {
    "filtered": {
      "filter": {
        "bool": {
          "must": [
            {
              "exists": {
                "field": "pmt_amount"
              }
            }
          ]
        }
      }
    }
  },
  "aggs": {
    "timestamp": {
      "date_histogram": {
        "field": "timestamp",
        "interval": "day"
      },
      "aggs": {
        "revenue": {
          "extended_stats": {
            "field": "pmt_amount"
          }
        }
      }
    }
  },
  "size": 0
}'

# Execute the query, parse result into a data.table
revenueDT <- es_search(
    es_host = 'http://mydb.mycompany.com:9200'
    , es_index = "transactions"
    , size = 1000
    , query_body = qbody
    , n_cores = 1
)

In the example above, we used the date_histogram and extended_stats aggregations. es_search() has built-in support for many other aggregations and combinations of aggregations, with more on the way. Please see the table below for the current status of the package. Note that names of the form “agg1 - agg2” refer to the ability to handled aggregations nested inside other aggregations.

Agg type	R support?	Python support?
“cardinality”	YES	NO
“date_histogram”	YES	NO
date_histogram - cardinality	YES	NO
date_histogram - extended_stats	YES	NO
date_histogram - histogram	YES	NO
date_histogram - percentiles	YES	NO
date_histogram - significant_terms	YES	NO
date_histogram - stats	YES	NO
date_histogram - terms	YES	NO
“extended_stats”	YES	NO
“histogram”	YES	NO
“percentiles”	YES	NO
“significant terms”	YES	NO
“stats”	YES	NO
“terms”	YES	NO
terms - cardinality	YES	NO
terms - date_histogram	YES	NO
terms - date_histogram - cardinality	YES	NO
terms - date_histogram - extended_stats	YES	NO
terms - date_histogram - histogram	YES	NO
terms - date_histogram - percentiles	YES	NO
terms - date_histogram - significant_terms	YES	NO
terms - date_histogram - stats	YES	NO
terms - date_histogram - terms	YES	NO
terms - extended_stats	YES	NO
terms - histogram	YES	NO
terms - percentiles	YES	NO
terms - significant_terms	YES	NO
terms - stats	YES	NO
terms - terms	YES	NO

Appendix: Links¶

Tools
Development \<\<\<\<\<\<\< HEAD:3-Resources/Tools/R/R Packages/Database R Packages/R Package - uptasticsearch.md
R
3-Resources/Tools/R/R Packages/R Packages =======
2-Areas/MOCs/R
3-Resources/Tools/Developer Tools/Programming Languages/R/R Packages/R Packages >>>>>>> develop:3-Resources/Tools/Developer Tools/Languages/R/R Packages/Database R Packages/R Package - uptasticsearch.md

Backlinks:

list from [[R Package - uptasticsearch]] AND -"Changelog"